Package: blimps-examples Description-md5: 18ddc9ff8aab78bc1efd53cccc24389d Description-en: blocks database improved searcher (example data) BLIMPS (BLocks IMProved Searcher) is a searching tool that scores a protein sequence against blocks or a block against sequences. . This package contains example data. Package: blimps-utils Description-md5: 1afe4567b883b39e7050a4f604a91e17 Description-en: blocks database improved searcher BLIMPS (BLocks IMProved Searcher) is a searching tool that scores a protein sequence against blocks or a block against sequences. . This package contains the binaries. Package: cuda-drivers-fabricmanager-580 Description-md5: 6715a1a6e39ab2cdf04d9fe216556c20 Description-en: Meta-package for FM and Driver Convenience meta-package for installing fabricmanager and the cuda-drivers meta-package simultaneously while keeping version equivalence. This meta- package is branch-specific. Package: firmware-qcom-dragonboard845c Description-md5: 3507088ed94312d44b4d5f5207d7374f Description-en: Binary firmware for various Qualcomm drivers used on Dragonboard 845c This package contains the binary firmware for GPU, USB, Venus, DSP hardware coprocessors found on SDM845, which is the main SoC on the Dragonboard 845c. Package: firmware-qcom-rb3gen2 Description-md5: 932dde057b2dbbe5130433652321aa51 Description-en: Binary firmware for Qualcomm Robotics RB3 Gen2 This package contains the binary firmware for the QCS6490, which is the main SoC on the Robotics RB3 Gen2. Package: firmware-qcom-rb5 Description-md5: 0abf8cbedf59bff7af0b4696550319c7 Description-en: Binary firmware for various Qualcomm drivers used on Robotics RB5 This package contains the binary firmware for the SM8250, which is the main SoC on the Robotics RB5. Package: gitaly-installer Description-md5: a0db51942a7c98ec821bffaf2b5a8789 Description-en: Git RPC service for handling all the git calls made by GitLab Gitaly makes the git data storage tier of large GitLab instances fast. This is achieved by moving git operations as close to the data as possible and Optimizing git services using caching. Gitaly is a core service of gitlab. This package installs Gitaly from pre-built binaries from Gitlab artifacts. Package: gitlab-common Description-md5: ccb3bd8dfffd14a6e75d53315368861a Description-en: git powered software platform to collaborate on code (common) gitlab provides web based interface to host source code and track issues. It allows anyone for fork a repository and send merge requests. Code review is possible using merge request workflow. Using groups and roles project access can be controlled. . This package includes configurations common to gitlab and gitaly. Package: lgeneral Description-md5: d3cd338c86e0144cd187ecea33e57ef8 Description-en: strategy game in the tradition of Panzer General LGeneral is a turn-based strategy game heavily inspired by Panzer General. You play single scenarios or whole campaigns turn by turn against a human player or the AI. . Entrenchment, rugged defense, defensive fire, surprise contacts, surrender, unit supply, weather influence, reinforcements and other implementations contribute to the tactical and strategic depth of the game. . This is the game engine only. LGeneral requires lgeneral-data or lgc-pg, which converts the game data of the original Panzer General game, to function properly. Package: libamgcl-dev Description-md5: ec65c5ece2e2ac48e9fba2a354789071 Description-en: Solves large sparse linear systems with algebraic multigrid method AMG is one of the most effective iterative methods for solution of equation systems arising, for example, from discretizing PDEs on unstructured grids. The method can be used as a black-box solver for various computational problems, since it does not require any information about the underlying geometry. AMG is often used not as a standalone solver but as a preconditioner within an iterative solver (e.g. Conjugate Gradients, BiCGStab, or GMRES). . AMGCL builds the AMG hierarchy on a CPU and then transfers it to one of the provided backends. This allows for transparent acceleration of the solution phase with help of OpenCL, CUDA, or OpenMP technologies. Users may provide their own backends which enables tight integration between AMGCL and the user code. . AMG is a header-only C++ library, with the headers provided by this package. Package: libblimps3 Description-md5: a1ad50ab461eca726e0a4e957f1a2ffa Description-en: blocks database improved searcher library BLIMPS (BLocks IMProved Searcher) is a searching tool that scores a protein sequence against blocks or a block against sequences. . This package provides the shared library. Package: libblimps3-dev Description-md5: 4d04b155f279229d68533b0ec59a8e4f Description-en: blocks database improved searcher library (development) BLIMPS (BLocks IMProved Searcher) is a searching tool that scores a protein sequence against blocks or a block against sequences. . This package provides the library development headers and the static library. Package: libgloo-cuda-0 Description-md5: 11fe5b4bb9197845522ecac87176ae15 Description-en: Collective communications library (shared object) Gloo is a collective communications library. It comes with a number of collective algorithms useful for machine learning applications. These include a barrier, broadcast, and allreduce. . Transport of data between participating machines is abstracted so that IP can be used at all times, or InifiniBand (or RoCE) when available. In the latter case, if the InfiniBand transport is used, GPUDirect can be used to accelerate cross machine GPU-to-GPU memory transfers. . Where applicable, algorithms have an implementation that works with system memory buffers, and one that works with NVIDIA GPU memory buffers. In the latter case, it is not necessary to copy memory between host and device; this is taken care of by the algorithm implementations. . This package ships the shared object for Gloo. Package: libgloo-cuda-dev Description-md5: 1eb5d67397fdb9a8162c5c082d1e6d78 Description-en: Collective communications library (development files) Gloo is a collective communications library. It comes with a number of collective algorithms useful for machine learning applications. These include a barrier, broadcast, and allreduce. . Transport of data between participating machines is abstracted so that IP can be used at all times, or InifiniBand (or RoCE) when available. In the latter case, if the InfiniBand transport is used, GPUDirect can be used to accelerate cross machine GPU-to-GPU memory transfers. . Where applicable, algorithms have an implementation that works with system memory buffers, and one that works with NVIDIA GPU memory buffers. In the latter case, it is not necessary to copy memory between host and device; this is taken care of by the algorithm implementations. . This package ships the development files. Package: libnvidia-nscq-580 Description-md5: 06d90fb68ae67655c00815a4db03a64e Description-en: NVSwitch Configuration and Query library NVIDIA NVSwitch Configuration and Query (NSCQ) library provides a stable driver API used by DCGM for monitoring NVSwitch devices. Package: libparmetis-dev Description-md5: 839c770f477cb92f6af09275d807c484 Description-en: Parallel Graph Partitioning and Sparse Matrix Ordering Libs: Devel ParMetis computes minimal-cut partitions of graphs and meshes in parallel, and orders variables for minimal fill when using direct solvers for sparse matrices. It does all this in parallel, and also can efficiently re-partition a graph or mesh whose connectivity has changed. . This package contains files needed to develop programs using ParMetis. Package: libparmetis4.0 Description-md5: 17a6686f47a3b63f4328881bffab697b Description-en: Parallel Graph Partitioning and Sparse Matrix Ordering Shared Libs ParMetis computes minimal-cut partitions of graphs and meshes in parallel, and orders variables for minimal fill when using direct solvers for sparse matrices. It does all this in parallel, and also can efficiently re-partition a graph or mesh whose connectivity has changed. . This package contains the ParMetis shared libraries. Package: librna-perl Description-md5: 895cf06070e423e768fdaf45508091e5 Description-en: ViennaRNA perl wrappers Perl wrappers above ViennaRNA library. . The Vienna RNA Package consists of a C code library and several stand-alone programs for the prediction and comparison of RNA secondary structures Package: nvidia-fabricmanager-580 Description-md5: 3d49e1346de8fc10beaca066b0eb5df0 Description-en: Fabric Manager for NVSwitch based systems. Fabric Manager for NVIDIA NVSwitch based systems. Package: nvidia-fabricmanager-dev-580 Description-md5: 565605cc6a127d423c88c38e5c2f9a26 Description-en: Fabric Manager API headers and associated library Fabric Manager API headers and associated library Package: nvidia-imex-580 Description-md5: f7a765b2a95d4cabcc9695466d5f6cc8 Description-en: IMEX Manager for NVIDIA based systems. IMEX Manager for NVIDIA systems. Package: parmetis-doc Description-md5: 55cc39b179c0b5b2dedead6fc6a8c34f Description-en: Parallel Graph Partitioning and Sparse Matrix Ordering Lib - Docs ParMetis computes minimal-cut partitions of graphs and meshes in parallel, and orders variables for minimal fill when using direct solvers for sparse matrices. It does all this in parallel, and also can efficiently re-partition a graph or mesh whose connectivity has changed. . This package contains the documentation and example files. Package: parmetis-test Description-md5: b9b53f52a3b7e53d03b5260911e600a9 Description-en: Parallel Graph Partitioning and Sparse Matrix Ordering Tests ParMetis computes minimal-cut partitions of graphs and meshes in parallel, and orders variables for minimal fill when using direct solvers for sparse matrices. It does all this in parallel, and also can efficiently re-partition a graph or mesh whose connectivity has changed. . This package contains programs which test the ParMetis libraries using files in the parmetis-doc package's examples directory. Package: python3-amgcl Description-md5: ecbb9c7c4315244c6b65581f6b220a1f Description-en: Solves large sparse linear systems with algebraic multigrid method AMG is one of the most effective iterative methods for solution of equation systems arising, for example, from discretizing PDEs on unstructured grids. The method can be used as a black-box solver for various computational problems, since it does not require any information about the underlying geometry. AMG is often used not as a standalone solver but as a preconditioner within an iterative solver (e.g. Conjugate Gradients, BiCGStab, or GMRES). . AMGCL builds the AMG hierarchy on a CPU and then transfers it to one of the provided backends. This allows for transparent acceleration of the solution phase with help of OpenCL, CUDA, or OpenMP technologies. Users may provide their own backends which enables tight integration between AMGCL and the user code. . This package provides the Python interface Package: python3-pyvkfft-cuda Description-md5: 57ea98ebe636a6b0393437bac86d8b5e Description-en: Binding to the CUDA backends of VkFFT - Python3 pyvkfft offers a simple python interface to the CUDA and OpenCL backends of VkFFT, compatible with pyCUDA, CuPy and pyOpenCL. . This package installs the CUDA backend. Package: python3-rna Description-md5: 310e3dd7fe72676202a1db1d473b4678 Description-en: ViennaRNA Python wrappers Python wrappers above ViennaRNA library. . The Vienna RNA Package consists of a C code library and several stand-alone programs for the prediction and comparison of RNA secondary structures Package: sift Description-md5: 7788bf12148938f8dc8e4675657ce605 Description-en: predicts if a substitution in a protein has a phenotypic effect SIFT is a sequence homology-based tool that sorts intolerant from tolerant amino acid substitutions and predicts whether an amino acid substitution in a protein will have a phenotypic effect. SIFT is based on the premise that protein evolution is correlated with protein function. Positions important for function should be conserved in an alignment of the protein family, whereas unimportant positions should appear diverse in an alignment. Package: vienna-rna Description-md5: cd4926e923e0b58439a80df654cba8f9 Description-en: RNA sequence analysis The Vienna RNA Package consists of a C code library and several stand-alone programs for the prediction and comparison of RNA secondary structures. It is developed and maintained by the group of Ivo Hofacker in Vienna. . RNA secondary structure prediction through energy minimization is the most used function in the package. It provides three kinds of dynamic programming algorithms for structure prediction: * the minimum free energy algorithm of (Zuker & Stiegler 1981) which yields a single optimal structure, * the partition function algorithm of (McCaskill 1990) which calculates base pair probabilities in the thermodynamic ensemble, and the suboptimal folding algorithm of (Wuchty et.al 1999) which generates all suboptimal structures within a given energy range of the optimal energy. . For secondary structure comparison, the package contains several measures of distance (dissimilarities) using either string alignment or tree-editing (Shapiro & Zhang 1990). Finally, is provided an algorithm to design sequences with a predefined structure (inverse folding). The RNAforester package is a tool for aligning RNA secondary structures and it's user interface integrates to those of the tools of the Vienna RNA package. Package: virtualbox Description-md5: 30f96d22c1a6ca04db16bdc1e79ad965 Description-en: x86 virtualization solution - base binaries VirtualBox is a free x86 virtualization solution allowing a wide range of x86 operating systems such as Windows, DOS, BSD or Linux to run on a Linux system. . This package provides the binaries for VirtualBox. Either the virtualbox-dkms or the virtualbox-source package is also required in order to compile the kernel modules needed for virtualbox. A graphical user interface for VirtualBox is provided by the package virtualbox-qt. Package: virtualbox-dkms Description-md5: 4d42f0fe51c4a92f2aed5071f84524ae Description-en: x86 virtualization solution - kernel module sources for dkms VirtualBox is a free x86 virtualization solution allowing a wide range of x86 operating systems such as Windows, DOS, BSD or Linux to run on a Linux system. . This package provides the source code for the virtualbox kernel module to be build with dkms. Kernel sources or headers are required to compile this module. Package: virtualbox-guest-utils Description-md5: 0c420aa026ad03a572b15c6e38dbebf7 Description-en: x86 virtualization solution - non-X11 guest utilities VirtualBox is a free x86 virtualization solution allowing a wide range of x86 operating systems such as Windows, DOS, BSD or Linux to run on a Linux system. . This package provides the non-X11 guest utilities for VirtualBox. These utilities are meant to be run inside the virtual machine. They provide closer integration and allow to share data through shared folders between the host system and the virtual machine. Package: virtualbox-guest-utils-hwe Description-md5: 085a4f5d1dd12642194b5145ef502845 Description-en: transitional package for virtualbox-guest-utils This is a transitional package for virtualbox-guest-utils. It can safely be removed Package: virtualbox-guest-x11 Description-md5: 3487afde0b114ec7e205b11f1dd3f7a5 Description-en: x86 virtualization solution - X11 guest utilities VirtualBox is a free x86 virtualization solution allowing a wide range of x86 operating systems such as Windows, DOS, BSD or Linux to run on a Linux system. . This package provides the X11 guest utilities for VirtualBox. These utilities are meant to be run inside the virtual machine. They provide closer integration and improve the interactive performance. Package: virtualbox-guest-x11-hwe Description-md5: 8c9e024d7632d31d73627e87a4c8bf2f Description-en: transitional package for virtualbox-guest-x11 This is a transitional package for virtualbox-guest-x11. It can safely be removed Package: virtualbox-qt Description-md5: 41ed29f36ba23b3ce0155f9a8efcff60 Description-en: x86 virtualization solution - Qt based user interface VirtualBox is a free x86 virtualization solution allowing a wide range of x86 operating systems such as Windows, DOS, BSD or Linux to run on a Linux system. . This package provides the Qt based graphical user interface for VirtualBox. Package: virtualbox-source Description-md5: 53035ede584988f3413156cb7a5dbe8b Description-en: x86 virtualization solution - kernel module source VirtualBox is a free x86 virtualization solution allowing a wide range of x86 operating systems such as Windows, DOS, BSD or Linux to run on a Linux system. . This package provides the source code for the virtualbox kernel module. The virtualbox package is also required in order to make use of these modules. Kernel sources or headers are required to compile this module. . The source is placed under /usr/src, and after decompression it can be built to produce a virtualbox-modules-_KVERS_ providing "virtualbox-modules" package.